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Description

Patient and sample attributes for the TCGA cohort were downloaded from the GDC data portal (gdc-tcga-phs000178-controlled) using the R package GenomicDataCommons version 1.18.0 and from the supplementary tables publicly available on the PanCanAtlas page ( Only patients included in the BRCA study of TCGA and for which we found no reason for exclusion were considered (Supplementary Fig